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GEO accession:
Sample GSM77701
Query DataSets for GSM77701
Status
Public on Nov 01, 2005
Title
aldosterone 5 hours
Sample type
RNA
Source name
heart
Organism
Mus musculus
Characteristics
Male C57BL6, whole heart
Extracted molecule
total RNA
Extraction protocol
Whole hearts were removed upon the sacrifice of the animal and immediately frozen in liquid nitrogen. RNA was extracted using Trizol reagent.
Label
biotin
Label protocol
Approximately 1 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
mouse whole heart aldosterone group 5 hours
Data processing
Affymetrix GCOS 1.2
Submission date
Oct 12, 2005
Last update date
Aug 28, 2018
Contact name
Alexander Turchin
E-mail(s)
aturchin@partners.org
Organization name
Brigham and Women's Hospital
Department
Division of Endocrinology
Street address
221 Longwood Avenue
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL1261
Series (1)
GSE3440
Effect of aldosterone on gene expression in the heart
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
GCOS1.2-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
4795.8
P
AFFX-BioB-M_at
7758.9
P
AFFX-BioB-3_at
3109.3
P
AFFX-BioC-5_at
12035.5
P
AFFX-BioC-3_at
12907
P
AFFX-BioDn-5_at
11179.3
P
AFFX-BioDn-3_at
59054.9
P
AFFX-CreX-5_at
179516.4
P
AFFX-CreX-3_at
203713.1
P
AFFX-DapX-5_at
77.2
A
AFFX-DapX-M_at
130.6
A
AFFX-DapX-3_at
243.2
A
AFFX-LysX-5_at
104
A
AFFX-LysX-M_at
47.8
A
AFFX-LysX-3_at
124.5
A
AFFX-PheX-5_at
71.7
A
AFFX-PheX-M_at
15
A
AFFX-PheX-3_at
83.6
A
AFFX-ThrX-5_at
48.2
A
AFFX-ThrX-M_at
19.6
A
Total number of rows:
45101
Table truncated, full table size
851 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM77701.CEL.gz
5.7 Mb
(ftp)
(http)
CEL
GSM77701.EXP.gz
510 b
(ftp)
(http)
EXP
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