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GEO accession:
Sample GSM77702
Query DataSets for GSM77702
Status
Public on Nov 01, 2005
Title
aldosterone 12 hours
Sample type
RNA
Source name
heart
Organism
Mus musculus
Characteristics
Male C57BL6, whole heart
Extracted molecule
total RNA
Extraction protocol
Whole hearts were removed upon the sacrifice of the animal and immediately frozen in liquid nitrogen. RNA was extracted using Trizol reagent.
Label
biotin
Label protocol
Approximately 1 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
mouse whole heart aldosterone-injected group 12 hours
Data processing
Affymetrix GCOS 1.2
Submission date
Oct 12, 2005
Last update date
Aug 28, 2018
Contact name
Alexander Turchin
E-mail(s)
aturchin@partners.org
Organization name
Brigham and Women's Hospital
Department
Division of Endocrinology
Street address
221 Longwood Avenue
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL1261
Series (1)
GSE3440
Effect of aldosterone on gene expression in the heart
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
GCOS1.2-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
4939.8
P
AFFX-BioB-M_at
8185.2
P
AFFX-BioB-3_at
3729.3
P
AFFX-BioC-5_at
12989.8
P
AFFX-BioC-3_at
13143.9
P
AFFX-BioDn-5_at
10875.9
P
AFFX-BioDn-3_at
71372.9
P
AFFX-CreX-5_at
210833
P
AFFX-CreX-3_at
264620
P
AFFX-DapX-5_at
71
A
AFFX-DapX-M_at
44.5
A
AFFX-DapX-3_at
39.2
A
AFFX-LysX-5_at
45.3
A
AFFX-LysX-M_at
56.4
A
AFFX-LysX-3_at
93.3
A
AFFX-PheX-5_at
15.1
A
AFFX-PheX-M_at
44.7
A
AFFX-PheX-3_at
148.4
A
AFFX-ThrX-5_at
49.6
A
AFFX-ThrX-M_at
174.6
A
Total number of rows:
45101
Table truncated, full table size
854 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM77702.CEL.gz
5.6 Mb
(ftp)
(http)
CEL
GSM77702.EXP.gz
510 b
(ftp)
(http)
EXP
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