GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM789724
Query DataSets for GSM789724
Status
Public on Sep 01, 2011
Title
hip_317_wt_m_2
Sample type
RNA
Source name
Mouse Brain Tissue
Organism
Mus musculus
Characteristics
genotype: wt
region: hip
timepoint: 2 month
gender: M
replicate: 5
Treatment protocol
None
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Qiagen RNAeasy
Label
Biotin
Label protocol
Standard Illumina protocol
Hybridization protocol
Standard Illumina protocol
Scan protocol
Standard Illumina protocol
Description
Hippocampus, WT mice, 2 MO
4697095042_H
Data processing
BeadStudio, quantile normalization
Submission date
Sep 01, 2011
Last update date
Sep 01, 2011
Contact name
Giovanni Coppola
E-mail(s)
gcoppola@ucla.edu
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6885
Series (1)
GSE31840
Gene Expression Study in Progranulin-Deficient Mice
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expression levels
Data table
ID_REF
VALUE
ILMN_1248788
6.94901600970817
ILMN_2707227
6.99348526794279
ILMN_2896528
11.730009961347
ILMN_2721178
9.82920446649207
ILMN_1227723
8.51614275931306
ILMN_3033922
10.2377150522403
ILMN_3092673
11.8747896546153
ILMN_2730714
11.770331924271
ILMN_3162224
10.483122360367
ILMN_2816356
7.77979083639755
ILMN_2808939
9.75923000928364
ILMN_2634564
8.67488418674627
ILMN_1216623
8.82375861072814
ILMN_1215157
9.29761629267776
ILMN_1228777
7.01366588279946
ILMN_2737647
6.80210878579027
ILMN_1216425
6.8439379000794
ILMN_2734484
8.32295385111274
ILMN_2652961
7.16843489284015
ILMN_2952292
7.08403091216376
Total number of rows:
25697
Table truncated, full table size
749 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
