NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM789748 Query DataSets for GSM789748
Status Public on Sep 01, 2011
Title ctx_263_ko_m_2
Sample type RNA
 
Source name Mouse Brain Tissue
Organism Mus musculus
Characteristics genotype: ko
region: ctx
timepoint: 2 month
gender: M
replicate: 5
Treatment protocol None
Growth protocol Standard
Extracted molecule total RNA
Extraction protocol Qiagen RNAeasy
Label Biotin
Label protocol Standard Illumina protocol
 
Hybridization protocol Standard Illumina protocol
Scan protocol Standard Illumina protocol
Description Cortex, KO mice, 2 MO
4697095040_B
Data processing BeadStudio, quantile normalization
 
Submission date Sep 01, 2011
Last update date Sep 01, 2011
Contact name Giovanni Coppola
E-mail(s) gcoppola@ucla.edu
Phone 310-794-4172
Organization name UCLA
Department Psychiatry and Neurology
Lab Neurogenetics
Street address 1524 Gonda, 695 Charles Young Drive South
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL6885
Series (1)
GSE31840 Gene Expression Study in Progranulin-Deficient Mice

Data table header descriptions
ID_REF
VALUE Log2 transformed, quantile normalized expression levels

Data table
ID_REF VALUE
ILMN_1248788 7.14209281092974
ILMN_2707227 7.15394465651435
ILMN_2896528 11.6206830947484
ILMN_2721178 9.56984133540485
ILMN_1227723 8.51614275931306
ILMN_3033922 9.55056548644489
ILMN_3092673 11.9004198784138
ILMN_2730714 11.746877089056
ILMN_3162224 10.2772412069928
ILMN_2816356 7.42594467811667
ILMN_2808939 9.86254785449173
ILMN_2634564 8.90409591090555
ILMN_1216623 8.99534484094474
ILMN_1215157 9.38595184719123
ILMN_1228777 6.79035358117601
ILMN_2737647 7.19019279059528
ILMN_1216425 6.98728117647293
ILMN_2734484 8.52553402661155
ILMN_2652961 6.76526704380609
ILMN_2952292 7.17683953363231

Total number of rows: 25697

Table truncated, full table size 749 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap