GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM789753
Query DataSets for GSM789753
Status
Public on Sep 01, 2011
Title
crb_303_het_m_2
Sample type
RNA
Source name
Mouse Brain Tissue
Organism
Mus musculus
Characteristics
genotype: het
region: crb
timepoint: 2 month
gender: M
replicate: 2
Treatment protocol
None
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Qiagen RNAeasy
Label
Biotin
Label protocol
Standard Illumina protocol
Hybridization protocol
Standard Illumina protocol
Scan protocol
Standard Illumina protocol
Description
Cerebellum, Heterozygous mice, 2 MO
4697095040_G
Data processing
BeadStudio, quantile normalization
Submission date
Sep 01, 2011
Last update date
Sep 01, 2011
Contact name
Giovanni Coppola
E-mail(s)
gcoppola@ucla.edu
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL6885
Series (1)
GSE31840
Gene Expression Study in Progranulin-Deficient Mice
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expression levels
Data table
ID_REF
VALUE
ILMN_1248788
7.46311307541908
ILMN_2707227
7.12119429207906
ILMN_2896528
12.1466089125172
ILMN_2721178
9.79627090376161
ILMN_1227723
9.14622451869615
ILMN_3033922
10.1573453948858
ILMN_3092673
11.9430475170815
ILMN_2730714
11.6571272392477
ILMN_3162224
10.5282998192154
ILMN_2816356
7.60200241494059
ILMN_2808939
10.5565918517843
ILMN_2634564
8.7779950624582
ILMN_1216623
8.97918329309646
ILMN_1215157
9.42841273272926
ILMN_1228777
6.9702601120725
ILMN_2737647
6.96018631483551
ILMN_1216425
6.87921381659036
ILMN_2734484
8.75753289960822
ILMN_2652961
6.85196834686574
ILMN_2952292
7.22958774531583
Total number of rows:
25697
Table truncated, full table size
750 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|