GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM789754 Query DataSets for GSM789754
Status Public on Sep 01, 2011
Title ctx_252_ko_m_2
Sample type RNA
Source name Mouse Brain Tissue
Organism Mus musculus
Characteristics genotype: ko
region: ctx
timepoint: 2 month
gender: M
replicate: 2
Treatment protocol None
Growth protocol Standard
Extracted molecule total RNA
Extraction protocol Qiagen RNAeasy
Label Biotin
Label protocol Standard Illumina protocol
Hybridization protocol Standard Illumina protocol
Scan protocol Standard Illumina protocol
Description Cortex, KO mice, 2 MO
Data processing BeadStudio, quantile normalization
Submission date Sep 01, 2011
Last update date Sep 01, 2011
Contact name Giovanni Coppola
Phone 310-794-4172
Organization name UCLA
Department Psychiatry and Neurology
Lab Neurogenetics
Street address 1524 Gonda, 695 Charles Young Drive South
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
Platform ID GPL6885
Series (1)
GSE31840 Gene Expression Study in Progranulin-Deficient Mice

Data table header descriptions
VALUE Log2 transformed, quantile normalized expression levels

Data table
ILMN_1248788 7.51170094994777
ILMN_2707227 6.91942487473624
ILMN_2896528 11.8512692595074
ILMN_2721178 9.53700047253555
ILMN_1227723 8.72505538667932
ILMN_3033922 9.55278711032981
ILMN_3092673 11.7441429668946
ILMN_2730714 11.7365518882775
ILMN_3162224 10.3286774109973
ILMN_2816356 7.36561205542028
ILMN_2808939 10.0646761808328
ILMN_2634564 8.56208027789044
ILMN_1216623 8.90755702240753
ILMN_1215157 9.26440216212445
ILMN_1228777 6.85865244640318
ILMN_2737647 7.01819159465669
ILMN_1216425 6.7729357846913
ILMN_2734484 8.58834199813033
ILMN_2652961 6.91862819839086
ILMN_2952292 7.32911915097689

Total number of rows: 25697

Table truncated, full table size 749 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap