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Sample GSM792735 Query DataSets for GSM792735
Status Public on May 18, 2012
Title 131I_medulla_260kBq_24h
Sample type RNA
 
Source name Mouse kidney medulla, 260kBq, 24h
Organism Mus musculus
Characteristics strain: Balb/c
tissue: kidney medulla
injected activity: 260kBq
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Sep 09, 2011
Last update date May 18, 2012
Contact name Emil Schüler
E-mail(s) emil.schuler@gu.se
Organization name University of Gothenburg
Street address Gula stråket 2B
City Göteborg
ZIP/Postal code 41346
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE32014 Effects of internal low dose irradiation from 131I on gene expression in normal mouse tissue

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2659724 99.5625 0.27191868
ILMN_2706226 94.5625 0.62261754
ILMN_1217123 89.0625 0.8678526
ILMN_2780205 7132.6875 0
ILMN_2713160 86.75 0.9606099
ILMN_2650094 90.5625 0.83989835
ILMN_2703479 102.0625 0.18170267
ILMN_2952493 94.5625 0.62261754
ILMN_2731592 124.0625 0
ILMN_2729743 157.3125 0
ILMN_1252621 227.125 0
ILMN_3162407 582.8125 0
ILMN_2692952 116.125 0
ILMN_2910076 96.625 0.49047014
ILMN_2709047 178.6875 0
ILMN_2718462 182.875 0
ILMN_2882078 217.8125 0
ILMN_2882079 116.5625 0
ILMN_2771368 97.0625 0.42439646
ILMN_2724039 100.25 0.27191868

Total number of rows: 25697

Table truncated, full table size 691 Kbytes.




Supplementary file Size Download File type/resource
GSM792735_4700303073_C_Grn.idat.gz 1.2 Mb (ftp)(http) IDAT
GSM792735_4700303073_C_beadTypeFile.txt.gz 164.2 Kb (ftp)(http) TXT
GSM792735_4700303073_C_perBeadFile.txt.gz 12.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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