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GEO accession:
Sample GSM79996
Query DataSets for GSM79996
Status
Public on Jan 01, 2006
Title
5 week bitransgenic Ker85
Sample type
RNA
Source name
Bitransgenic mouse 5week mammary gland
Organism
Mus musculus
Characteristics
5 week female Bitransgenic (LH crossed with MMTV-neu)
Extracted molecule
total RNA
Label
UTP-biotin
Description
5 week female Bitransgenic (LH crossed with MMTV-neu)
Data processing
Normalized Affymetrix signal intensities
Submission date
Oct 24, 2005
Last update date
Oct 25, 2005
Contact name
Melissa Landis
E-mail(s)
mdl9@case.edu
Phone
2163685924
Fax
2163683395
Organization name
Case Western Reserve School of Medicine
Department
Pharmacology
Lab
Ruth Keri
Street address
2109 Adelbert
City
Cleveland
State/province
OH
ZIP/Postal code
44106-4965
Country
USA
Platform ID
GPL1261
Series (1)
GSE3501
Comparative analysis of 10 week and 5 week Bitransgenic mice (LH mouse crossed with MMTV-neu mouse)
Data table header descriptions
ID_REF
VALUE
signal: a measure of the transcript abundance
ABS_CALL
call that indicates if transcript was present(P), absent(A), marginal(M), or no call (NC)
DETECTION P-VALUE
indicates the significance level of the detection call
Stat Pairs
number of probe pairs for a particular probe set on the array
Stat Pairs Used
= pairs - masked probe pairs - saturated MM probe pairs
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
Stat Pairs
Stat Pairs Used
1449217_at
881.9
P
0.000244
11
11
1455339_at
717.8
P
0.000732
11
11
1416040_at
23.8
A
0.747559
11
11
1417451_a_at
14351.2
P
0.000244
11
11
1432657_at
14.4
A
0.633789
11
11
1429703_at
64.8
A
0.334473
11
11
1455731_at
721.9
P
0.000244
11
11
1433082_at
12.7
A
0.72583
11
11
1435825_at
281.8
P
0.005859
11
11
1437723_s_at
4793
P
0.000244
11
11
1436350_at
127.8
P
0.030273
11
11
1447752_x_at
165.4
P
0.001953
11
11
1415730_at
1029.8
P
0.000732
11
11
1419896_at
143.5
A
0.171387
11
11
1452386_at
5.4
A
0.943848
11
11
1456654_at
127.9
A
0.432373
11
11
1423015_at
7.2
A
0.989258
11
11
1436748_at
160
A
0.303711
11
11
1432872_at
4.4
A
0.888428
11
11
1416263_at
331.5
A
0.067627
11
11
Total number of rows:
45101
Table truncated, full table size
1485 Kbytes
.
Supplementary data files not provided
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