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GEO accession:
Sample GSM79998
Query DataSets for GSM79998
Status
Public on Jan 01, 2006
Title
5 week bitransgenic Ker87
Sample type
RNA
Source name
Bitransgenic mouse 5week mammary gland
Organism
Mus musculus
Characteristics
5 week female Bitransgenic (LH crossed with MMTV-neu)
Extracted molecule
total RNA
Label
UTP-biotin
Description
5 week female Bitransgenic (LH crossed with MMTV-neu)
Data processing
Normalized Affymetrix signal intensities
Submission date
Oct 24, 2005
Last update date
Oct 25, 2005
Contact name
Melissa Landis
E-mail(s)
mdl9@case.edu
Phone
2163685924
Fax
2163683395
Organization name
Case Western Reserve School of Medicine
Department
Pharmacology
Lab
Ruth Keri
Street address
2109 Adelbert
City
Cleveland
State/province
OH
ZIP/Postal code
44106-4965
Country
USA
Platform ID
GPL1261
Series (1)
GSE3501
Comparative analysis of 10 week and 5 week Bitransgenic mice (LH mouse crossed with MMTV-neu mouse)
Data table header descriptions
ID_REF
VALUE
signal: a measure of the transcript abundance
ABS_CALL
call that indicates if transcript was present(P), absent(A), marginal(M), or no call (NC)
DETECTION P-VALUE
indicates the significance level of the detection call
Stat Pairs
number of probe pairs for a particular probe set on the array
Stat Pairs Used
= pairs - masked probe pairs - saturated MM probe pairs
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
Stat Pairs
Stat Pairs Used
1453566_at
45.3
A
0.601074
11
11
1443101_at
1.2
A
0.981445
11
11
1417443_at
105.4
P
0.046143
11
11
1421982_a_at
2094.9
P
0.000244
11
11
1456734_at
450.1
A
0.303711
11
11
1457267_at
219.8
P
0.005859
11
11
1437753_at
80
M
0.056152
11
11
1417266_at
2827.5
P
0.000244
11
11
1433875_at
1630.2
P
0.000244
11
11
1434018_at
1511.7
P
0.000732
11
11
1430242_at
78.7
M
0.056152
11
11
1453781_at
144.1
A
0.095215
11
11
1430590_at
121.2
P
0.023926
11
11
1447648_at
7.5
A
0.533936
11
11
1423866_at
108.5
M
0.056152
11
11
1424009_at
43.9
A
0.27417
11
11
1432103_a_at
266.9
A
0.080566
11
11
1420133_at
129.2
A
0.111572
11
11
1443772_at
197.4
P
0.023926
11
11
1460524_at
29.6
A
0.533936
11
11
Total number of rows:
45101
Table truncated, full table size
1485 Kbytes
.
Supplementary data files not provided
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