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Sample GSM800440 Query DataSets for GSM800440
Status Public on Feb 13, 2013
Title 211At_thyroid_0.05_Gy_#2
Sample type RNA
 
Source name Mouse thyroid, 0.05 Gy, 24h
Organism Mus musculus
Characteristics strain: BALB/c
tissue: thyroid
absorbed dose: 0.05 Gy
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing Data preprocessing and quantile normalization were applied to the raw signal intensities using BASE. Further data processing was done in Nexus Expression 2.0 (BioDiscovery).
 
Submission date Sep 22, 2011
Last update date Feb 13, 2013
Contact name Nils Rudqvist
E-mail(s) nils.rudqvist@radfys.gu.se
Organization name Gothenburg university
Street address Gula stråket 2b
City Göteborg
State/province VG
ZIP/Postal code 41345
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE32306 Transcriptional response of mouse thyroids following in vivo 211At exposure reveals distinct gene expression profiles

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2607609 715.625 0
ILMN_1238674 90.666664 0.7509482
ILMN_3062534 97.666664 0.32869786
ILMN_3140158 223.5 0
ILMN_2674533 168.79167 0
ILMN_2680307 163.29167 0
ILMN_2935307 86.583336 0.9051833
ILMN_1215893 222.625 0
ILMN_2910106 224.79167 0
ILMN_2732092 115.875 0
ILMN_2603725 1238.875 0
ILMN_2664884 122.75 0
ILMN_3003575 83.75 0.97471553
ILMN_1229397 92.666664 0.63084704
ILMN_1225873 111.458336 0.011378002
ILMN_2899591 386.875 0
ILMN_2658355 94.541664 0.5018963
ILMN_2682763 94.541664 0.5018963
ILMN_2521511 88.583336 0.8305942
ILMN_2691286 89.583336 0.80151707

Total number of rows: 25697

Table truncated, full table size 732 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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