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Sample GSM800446 Query DataSets for GSM800446
Status Public on Feb 13, 2013
Title 211At_thyroid_0.5_Gy_#3
Sample type RNA
 
Source name Mouse thyroid, 0.5 Gy, 24h
Organism Mus musculus
Characteristics strain: BALB/c
tissue: thyroid
absorbed dose: 0.5 Gy
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing Data preprocessing and quantile normalization were applied to the raw signal intensities using BASE. Further data processing was done in Nexus Expression 2.0 (BioDiscovery).
 
Submission date Sep 22, 2011
Last update date Feb 13, 2013
Contact name Nils Rudqvist
E-mail(s) nils.rudqvist@radfys.gu.se
Organization name Gothenburg university
Street address Gula stråket 2b
City Göteborg
State/province VG
ZIP/Postal code 41345
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE32306 Transcriptional response of mouse thyroids following in vivo 211At exposure reveals distinct gene expression profiles

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2607609 655 0
ILMN_1238674 86.125 0.9301143
ILMN_3062534 99.5 0.1905972
ILMN_3140158 238.95833 0
ILMN_2674533 186.79167 0
ILMN_2680307 182.5 0
ILMN_2935307 92.416664 0.59466326
ILMN_1215893 210.95833 0
ILMN_2910106 200.125 0
ILMN_2732092 122.291664 0
ILMN_2603725 1240.2084 0
ILMN_2664884 134.58333 0
ILMN_3003575 107.875 0.017789073
ILMN_1229397 84.375 0.9682338
ILMN_1225873 113.833336 0
ILMN_2899591 469.75 0
ILMN_2658355 99.5 0.1905972
ILMN_2682763 96.458336 0.33418044
ILMN_2521511 93.291664 0.54892
ILMN_2691286 92.416664 0.59466326

Total number of rows: 25697

Table truncated, full table size 721 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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