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Sample GSM800450 Query DataSets for GSM800450
Status Public on Feb 13, 2013
Title 211At_thyroid_1.4_Gy_#2
Sample type RNA
 
Source name Mouse thyroid, 1.4 Gy, 24h
Organism Mus musculus
Characteristics strain: BALB/c
tissue: thyroid
absorbed dose: 1.4 Gy
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing Data preprocessing and quantile normalization were applied to the raw signal intensities using BASE. Further data processing was done in Nexus Expression 2.0 (BioDiscovery).
 
Submission date Sep 22, 2011
Last update date Feb 13, 2013
Contact name Nils Rudqvist
E-mail(s) nils.rudqvist@radfys.gu.se
Organization name Gothenburg university
Street address Gula stråket 2b
City Göteborg
State/province VG
ZIP/Postal code 41345
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE32306 Transcriptional response of mouse thyroids following in vivo 211At exposure reveals distinct gene expression profiles

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2607609 1511.9375 0
ILMN_1238674 109.5125 0.22795969
ILMN_3062534 109.525 0.22795969
ILMN_3140158 264.775 0
ILMN_2674533 247.925 0
ILMN_2680307 156.125 0
ILMN_2935307 100.1375 0.6549118
ILMN_1215893 230.225 0
ILMN_2910106 217.5375 0
ILMN_2732092 138.8625 0
ILMN_2603725 2123.625 0
ILMN_2664884 283.8625 0
ILMN_3003575 107.9625 0.27329975
ILMN_1229397 107.9625 0.27329975
ILMN_1225873 129.525 0.010075566
ILMN_2899591 380.1875 0
ILMN_2658355 115.7875 0.09697733
ILMN_2682763 101.2875 0.58564234
ILMN_2521511 103.8875 0.4534005
ILMN_2691286 93.15 0.9508816

Total number of rows: 25697

Table truncated, full table size 711 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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