NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM800453 Query DataSets for GSM800453
Status Public on Feb 13, 2013
Title 211At_thyroid_11.2_Gy_#1
Sample type RNA
 
Source name Mouse thyroid, 11.2 Gy, 24h
Organism Mus musculus
Characteristics strain: BALB/c
tissue: thyroid
absorbed dose: 11.2 Gy
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing Data preprocessing and quantile normalization were applied to the raw signal intensities using BASE. Further data processing was done in Nexus Expression 2.0 (BioDiscovery).
 
Submission date Sep 22, 2011
Last update date Feb 13, 2013
Contact name Nils Rudqvist
E-mail(s) nils.rudqvist@radfys.gu.se
Organization name Gothenburg university
Street address Gula stråket 2b
City Göteborg
State/province VG
ZIP/Postal code 41345
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE32306 Transcriptional response of mouse thyroids following in vivo 211At exposure reveals distinct gene expression profiles

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2607609 1367.625 0
ILMN_1238674 98.1875 0.77415305
ILMN_3062534 101.8875 0.5909661
ILMN_3140158 324.45 0
ILMN_2674533 224.75 0
ILMN_2680307 159.475 0
ILMN_2935307 108.8875 0.25219575
ILMN_1215893 326.575 0
ILMN_2910106 246.975 0
ILMN_2732092 121.7875 0.048933502
ILMN_2603725 1591.6625 0
ILMN_2664884 196.7125 0
ILMN_3003575 112.1 0.16311167
ILMN_1229397 94.5375 0.92471766
ILMN_1225873 117.725 0.0727729
ILMN_2899591 625.05 0
ILMN_2658355 103.2 0.5081556
ILMN_2682763 117.725 0.0727729
ILMN_2521511 99.4125 0.71769136
ILMN_2691286 104.575 0.42910916

Total number of rows: 25697

Table truncated, full table size 713 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap