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Sample GSM801460 Query DataSets for GSM801460
Status Public on Sep 26, 2011
Title Treg+iso rep2
Sample type RNA
 
Source name mouse spleen Treg
Organism Mus musculus
Characteristics strain: C57Bl/6
age: 8-12 wks
protocol: o.n. activation with anti-CD3 + rat IgG
Extracted molecule total RNA
Extraction protocol RNA was purified with AMBION mirVANA kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina RNA TotalPrep amplification kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 5511141042_C
replicate 2
Data processing The data were normalised using quantile normalisation with Illumina BeadStudio Gene Expression Module v3
 
Submission date Sep 26, 2011
Last update date Sep 26, 2011
Contact name Paola Pittoni
E-mail(s) paola.pittoni@istitutotumori.mi.it
Phone +39 0223903232
Fax +39 0223902630
Organization name IRCCS Istituto Nazionale dei Tumori
Department Dept. Experimental Oncology
Lab Molecular Immunology Unit
Street address Via Amadeo, 42
City Milan
State/province Italy
ZIP/Postal code 20133
Country Italy
 
Platform ID GPL6885
Series (1)
GSE32373 Gene expression analysis of OX40-triggered mouse Treg

Data table header descriptions
ID_REF
VALUE quantile normalized signal
5511141042_C.Detection Pval

Data table
ID_REF VALUE 5511141042_C.Detection Pval
ILMN_2896528 2244.999 0
ILMN_2721178 833.1656 0
ILMN_3033922 808.9734 0
ILMN_3092673 1861.641 0
ILMN_2816356 301.6843 0.1629073
ILMN_2808939 844.8798 0
ILMN_2634564 823.9471 0
ILMN_2737647 269.6743 0.6152882
ILMN_2734484 399.2716 0
ILMN_2952292 366.7213 0.005012531
ILMN_2699078 295.2411 0.216792
ILMN_1213681 500.4908 0
ILMN_2735413 239.1641 0.9473684
ILMN_2735415 277.6072 0.4837093
ILMN_2891688 1720.122 0
ILMN_2637698 1522.036 0
ILMN_2674228 600.1795 0
ILMN_2601546 308.7274 0.1165414
ILMN_1230831 272.3507 0.5676692
ILMN_2848071 268.7706 0.6328321

Total number of rows: 25697

Table truncated, full table size 736 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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