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Sample GSM801625 Query DataSets for GSM801625
Status Public on Apr 01, 2012
Title C57Bl6_2
Sample type RNA
Source name adrenal
Organism Mus musculus
Characteristics background strain: C57BL/6
tissue: adrenal
genotype/variation: normal
Treatment protocol none
Growth protocol Mice transgenic for neural crest specific expression of MYCN, mutated ALK or both were monitored until tumor was palpable and sacrificed afterwards.
Extracted molecule total RNA
Extraction protocol RNA was extracted from tumors or control tissue using the QIAGEN Rneasy mini kit.
Label biotin
Label protocol Biotin labelling was performed according the manufacturer's recommendations (Affymetrix).
Hybridization protocol Hybridisation to mouse 430_2 arrays was performed according to the manufacturer's recommendations (Affymetrix).
Scan protocol Scanning of chips was performed using a GeneArray scanner (Agilent).
Description normal adrenal tissue
Data processing Signal intensities were RMA normalized using PARTEK Genomics Suite, with the .CEL files as input.
Submission date Sep 26, 2011
Last update date Apr 13, 2012
Contact name Alexander Schramm
Organization name University Hospital Essen
Department Childrens Hospital
Lab Hematology/Oncology Lab
Street address Hufelandstr. 55
City Essen
ZIP/Postal code 45122
Country Germany
Platform ID GPL1261
Series (1)
GSE32386 Expression profiling of murine neuroblastoma in transgenic mice

Data table header descriptions
VALUE RMA-normalized signal intensity

Data table
1415670_at 9.22421
1415671_at 11.1703
1415672_at 11.1601
1415673_at 9.35124
1415674_a_at 10.1864
1415675_at 8.98818
1415676_a_at 11.5381
1415677_at 9.72826
1415678_at 10.6362
1415679_at 11.1783
1415680_at 8.88677
1415681_at 10.321
1415682_at 7.6732
1415683_at 10.9755
1415684_at 9.09096
1415685_at 9.54624
1415686_at 9.71435
1415687_a_at 12.799
1415688_at 10.0391
1415689_s_at 9.09799

Total number of rows: 45101

Table truncated, full table size 849 Kbytes.

Supplementary file Size Download File type/resource
GSM801625.CEL.gz 3.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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