NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM80172 Query DataSets for GSM80172
Status Public on Feb 03, 2006
Title adult head_CT6_experimentywtim2
Sample type RNA
 
Source name adult head
Organism Drosophila melanogaster
Characteristics y w; tim01 arrhythmic mutant stock, adult head
Extracted molecule total RNA
Extraction protocol Flies were immediately frozen on dry ice. Approximately 100-200 heads were isolated on sieves after breaking the frozen flies
Label biotin
Label protocol Approximately 25 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description none
Data processing Bioconductor Robust Multi-array Average
 
Submission date Oct 26, 2005
Last update date Feb 03, 2006
Contact name Herman Wijnen
E-mail(s) hw3a11@soton.ac.uk
Phone 02380594336
Organization name University of Southampton
Department Centre for Biological Sciences
Lab Wijnen
Street address Life Sciences Building 85 - Highfield Campus
City Southampton
State/province Hampshire
ZIP/Postal code SO17 1BJ
Country United Kingdom
 
Platform ID GPL72
Series (2)
GSE3832 LD/DD time course of y w; tim01 Drosophila #2
GSE3842 LD/DD time course of y w; tim01, cn bw, and y w Drosophila

Data table header descriptions
ID_REF
NVALUE RMA calculated signal intensity normalized to the experimental average (set at 0)
VALUE RMA calculated signal intensity

Data table
ID_REF NVALUE VALUE
141200_at 0.29 2.702
141201_at 0.1 4.021
141202_at -0.04 4.889
141203_at -0.08 3.33
141204_at -0.01 4.15
141205_at 0.05 3.751
141206_at 0.05 5.999
141207_at -0.1 2.955
141208_at -0.35 5.501
141209_at 0 5.912
141210_at -0.04 2.388
141211_at 0.11 3.526
141212_at 0.08 7.569
141213_at -0.47 4.071
141214_at 0.03 6.224
141215_at 0.11 6.125
141216_at -0.04 5.335
141217_at -0.09 7.039
141218_at -0.06 4.971
141219_at 0.05 2.549

Total number of rows: 14010

Table truncated, full table size 290 Kbytes.




Supplementary file Size Download File type/resource
GSM80172.CEL.gz 2.5 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap