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Sample GSM827096 Query DataSets for GSM827096
Status Public on Nov 05, 2011
Title Heart 4 month old WT rep1 (mouse 5976)
Sample type RNA
 
Source name Heart 4 month old WT rep1 (mouse 5976)
Organism Mus musculus
Characteristics strain: wild type
genetic background: C57BL/6J
tissue: heart
age: 4 mo
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol folowed by Dnase treatment using Qiagen Rneasy minikit using manufacturers protocls. Quality control was performed with Agilent 2100 Expert Bioanalyzer
Label biotin
Label protocol Biotinylated cRMA were prepared with the Ambion MessageAMP kit for Illumina arrays
 
Hybridization protocol Standard Illumina hydridization protocols
Scan protocol Standard Illumina scanning protocols
Description Wildtype replicate 1
Data processing The data were normalized using quantile normalization
 
Submission date Nov 03, 2011
Last update date Nov 05, 2011
Contact name Michael Andrew Kiebish
E-mail(s) kiebish@wustl.edu
Phone 314-362-2229
Fax 314-362-1402
Organization name Washington University School of Medicine
Department Internal Medicine
Lab Richard W. Gross
Street address 660 South Euclid Avenue, Campus Box 8020
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL6885
Series (1)
GSE33451 Genome-wide analysis of gene transcription in myocardium of mice transgenically expressing human cardiolipin synthase 1 (hCLS1) in cardiac tissue

Data table header descriptions
ID_REF
VALUE Quantile normalization
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 3053.191 0
ILMN_2721178 1103.492 0
ILMN_3033922 458.4148 0
ILMN_3092673 1561.31 0
ILMN_2816356 8.707118 0.2042606
ILMN_2808939 38.5749 0.001253133
ILMN_2634564 40.95948 0.001253133
ILMN_2737647 15.25783 0.06766918
ILMN_2734484 -17.19179 0.9373434
ILMN_2952292 8.068593 0.2205514
ILMN_2699078 -1.028208 0.5388471
ILMN_1213681 820.1351 0
ILMN_2735413 -1.930931 0.5802005
ILMN_2735415 11.69234 0.1253133
ILMN_2891688 56.05879 0
ILMN_2637698 79.40629 0
ILMN_2674228 122.6115 0
ILMN_2601546 1.462086 0.4348371
ILMN_1230831 -0.6855045 0.5250627
ILMN_2848071 -1.204964 0.5501253

Total number of rows: 25697

Table truncated, full table size 761 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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