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Sample GSM827097 Query DataSets for GSM827097
Status Public on Nov 05, 2011
Title Heart 4 month old WT rep2 (mouse 5977)
Sample type RNA
 
Source name Heart 4 month old WT rep2 (mouse 5977)
Organism Mus musculus
Characteristics strain: wild type
genetic background: C57BL/6J
tissue: heart
age: 4 mo
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol folowed by Dnase treatment using Qiagen Rneasy minikit using manufacturers protocls. Quality control was performed with Agilent 2100 Expert Bioanalyzer
Label biotin
Label protocol Biotinylated cRMA were prepared with the Ambion MessageAMP kit for Illumina arrays
 
Hybridization protocol Standard Illumina hydridization protocols
Scan protocol Standard Illumina scanning protocols
Description Wildtype replicate 2
Data processing The data were normalized using quantile normalization
 
Submission date Nov 03, 2011
Last update date Nov 05, 2011
Contact name Michael Andrew Kiebish
E-mail(s) kiebish@wustl.edu
Phone 314-362-2229
Fax 314-362-1402
Organization name Washington University School of Medicine
Department Internal Medicine
Lab Richard W. Gross
Street address 660 South Euclid Avenue, Campus Box 8020
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL6885
Series (1)
GSE33451 Genome-wide analysis of gene transcription in myocardium of mice transgenically expressing human cardiolipin synthase 1 (hCLS1) in cardiac tissue

Data table header descriptions
ID_REF
VALUE Quantile normalization
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2983.152 0
ILMN_2721178 1110.952 0
ILMN_3033922 511.1765 0
ILMN_3092673 1680.091 0
ILMN_2816356 2.985541 0.4235589
ILMN_2808939 51.08831 0.001253133
ILMN_2634564 44.34035 0.001253133
ILMN_2737647 53.82924 0.001253133
ILMN_2734484 -4.819844 0.7055138
ILMN_2952292 22.28412 0.04010025
ILMN_2699078 -1.694279 0.6102757
ILMN_1213681 867.1732 0
ILMN_2735413 -7.427549 0.764411
ILMN_2735415 16.38878 0.0877193
ILMN_2891688 43.50381 0.001253133
ILMN_2637698 96.32275 0
ILMN_2674228 130.9261 0
ILMN_2601546 -1.303825 0.5989975
ILMN_1230831 -0.03333338 0.5451128
ILMN_2848071 21.28613 0.04511278

Total number of rows: 25697

Table truncated, full table size 765 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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