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Sample GSM827102 Query DataSets for GSM827102
Status Public on Nov 05, 2011
Title Heart 4 month old CLS rep3 (mouse 5979)
Sample type RNA
 
Source name Heart 4 month old CLS rep3 (mouse 5979)
Organism Mus musculus
Characteristics strain: transgenic hCLS1
genetic background: C57BL/6J
tissue: heart
age: 4 mo
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol folowed by Dnase treatment using Qiagen Rneasy minikit using manufacturers protocls. Quality control was performed with Agilent 2100 Expert Bioanalyzer
Label biotin
Label protocol Biotinylated cRMA were prepared with the Ambion MessageAMP kit for Illumina arrays
 
Hybridization protocol Standard Illumina hydridization protocols
Scan protocol Standard Illumina scanning protocols
Description Tg-CLS replicate 3
Data processing The data were normalized using quantile normalization
 
Submission date Nov 03, 2011
Last update date Nov 05, 2011
Contact name Michael Andrew Kiebish
E-mail(s) kiebish@wustl.edu
Phone 314-362-2229
Fax 314-362-1402
Organization name Washington University School of Medicine
Department Internal Medicine
Lab Richard W. Gross
Street address 660 South Euclid Avenue, Campus Box 8020
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL6885
Series (1)
GSE33451 Genome-wide analysis of gene transcription in myocardium of mice transgenically expressing human cardiolipin synthase 1 (hCLS1) in cardiac tissue

Data table header descriptions
ID_REF
VALUE Quantile normalization
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 3083.757 0
ILMN_2721178 912.3254 0
ILMN_3033922 532.6157 0
ILMN_3092673 1716.045 0
ILMN_2816356 5.980154 0.3145363
ILMN_2808939 38.47713 0
ILMN_2634564 65.38791 0
ILMN_2737647 18.49934 0.05764411
ILMN_2734484 0.07858507 0.5012531
ILMN_2952292 8.017358 0.2443609
ILMN_2699078 -10.14541 0.8358396
ILMN_1213681 702.527 0
ILMN_2735413 -8.422135 0.7957394
ILMN_2735415 0.2625631 0.4949875
ILMN_2891688 73.71571 0
ILMN_2637698 116.6227 0
ILMN_2674228 129.819 0
ILMN_2601546 11.46492 0.1553885
ILMN_1230831 -1.263951 0.5438597
ILMN_2848071 6.712504 0.2869674

Total number of rows: 25697

Table truncated, full table size 754 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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