|
| Status |
Public on Jan 23, 2020 |
| Title |
wild-type c57b6/sv129 mixed bkg WAT, DIO, treated with Rosiglitazone, technical replicate of bio rep 2 |
| Sample type |
RNA |
| |
|
| Source name |
Epididymal white adipose tissue
|
| Organism |
Mus musculus |
| Characteristics |
strain: wild-type c57b6/sv129 mixed bkg
age: 4-5 months old
treatment: High Fat diet for 10 weeks, last 2 weeks + 10mg/kg rosiglitazone
genetic background: mixed c57b6/sv129
tissue: Epididymal white adipose tissue
disease state: Diet-induced Obesity
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Data processing |
The data were normalized using the VAMPIRE Bayesian model with a 2-sided Bonferroni-corrected threshold of 0.05.
|
| |
|
| Submission date |
Nov 14, 2011 |
| Last update date |
Jan 23, 2020 |
| Contact name |
Ruth T Yu |
| Organization name |
Salk Institute
|
| Department |
Gene Expression Lab
|
| Lab |
Ronald Evans
|
| Street address |
10010 N Torrey Pines Rd
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92037 |
| Country |
USA |
| |
|
| Platform ID |
GPL6885 |
| Series (1) |
| GSE33684 |
Fibroblast Growth Factor-21 Regulates PPARĪ³ Activity and the Antidiabetic Actions of Thiazolidinediones |
|
