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Sample GSM833287 Query DataSets for GSM833287
Status Public on Dec 04, 2011
Title Control replicate 1
Sample type RNA
 
Source name S17 cell control
Organism Mus musculus
Characteristics cell line: S17
cell type: Stromal cell
Treatment protocol control
Growth protocol SC S17 growing in 10-cm dishes were trypsinized in 0.25% trypsin solution and resuspended with MEM containing 2% FBS.
Extracted molecule total RNA
Extraction protocol Qiagen Rneasy
Label biotin
Label protocol Biotinylated cRNA was prepared according to the instructions of the manufacturer.
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description Data from control S17 cells
SAMPLE 1
Data processing Rma normalized in R
 
Submission date Nov 15, 2011
Last update date Dec 04, 2011
Contact name Ola Larsson
E-mail(s) ola.larsson@ki.se
Phone +46 (0)8 517 73280
Organization name Karolinska Institutet
Department Department of oncology-pathology
Street address CCK, R8:01
City Stockholm
ZIP/Postal code 171 76
Country Sweden
 
Platform ID GPL7546
Series (1)
GSE33717 PDGF-BB modulates hematopoiesis and tumor angiogenesis by inducing erythropoietin production in stromal cells.

Data table header descriptions
ID_REF
VALUE log2 expression values

Data table
ID_REF VALUE
100009600_at 4.771349776
100012_at 2.833994088
100017_at 7.368669513
100019_at 7.607609517
100034251_at 4.637669549
100036521_at 9.162347614
100037258_at 8.586810624
100037278_at 6.270221698
100038570_at 5.552511894
100038635_at 3.419292288
100038680_at 3.492629338
100038887_at 11.93089018
100038959_at 6.173657136
100039026_at 6.957659508
100039027_at 3.360349018
100039094_at 3.73559997
100039235_at 5.620712136
100039282_at 2.650943481
100039284_at 5.554473236
100039307_at 4.871222605

Total number of rows: 16539

Table truncated, full table size 343 Kbytes.




Supplementary file Size Download File type/resource
GSM833287_C1.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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