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Sample GSM833289 Query DataSets for GSM833289
Status Public on Dec 04, 2011
Title Control replicate 3
Sample type RNA
 
Source name S17 cell control
Organism Mus musculus
Characteristics cell line: S17
cell type: Stromal cell
Treatment protocol control
Growth protocol SC S17 growing in 10-cm dishes were trypsinized in 0.25% trypsin solution and resuspended with MEM containing 2% FBS.
Extracted molecule total RNA
Extraction protocol Qiagen Rneasy
Label biotin
Label protocol Biotinylated cRNA was prepared according to the instructions of the manufacturer.
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description Data from control S17 cells
SAMPLE 3
Data processing Rma normalized in R
 
Submission date Nov 15, 2011
Last update date Dec 04, 2011
Contact name Ola Larsson
E-mail(s) ola.larsson@ki.se
Phone +46 (0)8 517 73280
Organization name Karolinska Institutet
Department Department of oncology-pathology
Street address CCK, R8:01
City Stockholm
ZIP/Postal code 171 76
Country Sweden
 
Platform ID GPL7546
Series (1)
GSE33717 PDGF-BB modulates hematopoiesis and tumor angiogenesis by inducing erythropoietin production in stromal cells.

Data table header descriptions
ID_REF
VALUE log2 expression values

Data table
ID_REF VALUE
100009600_at 4.75759022
100012_at 2.867928792
100017_at 7.432688285
100019_at 7.591986776
100034251_at 4.786008104
100036521_at 9.16445055
100037258_at 8.535710216
100037278_at 6.023301674
100038570_at 5.650065444
100038635_at 3.205486009
100038680_at 3.565422038
100038887_at 12.00702472
100038959_at 6.209403669
100039026_at 6.866549866
100039027_at 3.129668216
100039094_at 3.817875421
100039235_at 5.923663097
100039282_at 2.553118155
100039284_at 5.64693557
100039307_at 4.849587107

Total number of rows: 16539

Table truncated, full table size 343 Kbytes.




Supplementary file Size Download File type/resource
GSM833289_C3.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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