|
Status |
Public on May 31, 2015 |
Title |
Adipocyte maturating day 18 replicate 2 |
Sample type |
RNA |
|
|
Source name |
D18 adipocytes
|
Organism |
Mus musculus |
Characteristics |
time point: day 18 cell type: adipocytes developmental stage: Adipocyte maturating treatment: differentiation medium (IBMX), insulin and dexamethasone, and maturation medium containing insulin cell line: NIH 3T3 L1
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy midi kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with gel electrophoreses.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol using HiScan
|
Description |
replicate 2
|
Data processing |
The data were normalised using cubic spline normalisation with Illumina Genomestudio 2011.1
|
|
|
Submission date |
Dec 05, 2011 |
Last update date |
May 31, 2015 |
Contact name |
Martin Irmler |
Organization name |
Helmholtz Zentrum München GmbH
|
Department |
Institute of Experimental Genetics
|
Lab |
Gene Regulation & Epigenetics
|
Street address |
Ingolstaedter Landstrasse 1
|
City |
Neuherberg |
State/province |
Bayern |
ZIP/Postal code |
85764 |
Country |
Germany |
|
|
Platform ID |
GPL6885 |
Series (1) |
GSE34150 |
Genome-wide expression profiling analysis of a time course of differentiating adipocytes |
|