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GEO accession:
Sample GSM855952
Query DataSets for GSM855952
Status
Public on Mar 01, 2012
Title
Pediatric_GBM_29
Sample type
RNA
Source name
Primary brain tumor tissue
Organism
Homo sapiens
Characteristics
disease state: paediatric glioblastoma
age: 15
gender: M
h3.3_status: wt
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
biotin
Label protocol
Affymetrix protocol
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
Gene expression data from a primary pediatric glioblastoma
Data processing
Normalization according to MAS5.0 algorithm. Only probesets called present in at least one sample were included
Submission date
Jan 03, 2012
Last update date
Mar 01, 2012
Contact name
Marcel Kool
E-mail(s)
m.kool@dkfz.de
Phone
00496221424636
Organization name
German Cancer Research Center
Department
Pediatric Neuro Oncology
Street address
Im Neuenheimer Feld 580
City
Heidelberg
ZIP/Postal code
69120
Country
Germany
Platform ID
GPL570
Series (1)
GSE34824
Frequent driver mutations in histone H3.3 and chromatin remodeling genes in paediatric glioblastoma
Data table header descriptions
ID_REF
VALUE
MAS5.0 signal intensity
Data table
ID_REF
VALUE
1552829_at
24
1552867_at
20.8
1552972_at
2.8
1552976_at
20.3
1553269_at
75.3
1553275_s_at
25.9
1553538_s_at
7070.4
1553547_at
15.1
1553569_at
6745.4
1553570_x_at
6793.1
1553575_at
216.4
1553979_at
577.5
1554007_at
475.9
1554043_a_at
53.3
1554103_at
7.7
1554108_at
21.7
1554220_a_at
7.9
1554224_at
43
1554225_a_at
164.6
1554266_at
26
Total number of rows:
40777
Table truncated, full table size
631 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM855952.CEL.gz
4.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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