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GEO accession:
Sample GSM855953
Query DataSets for GSM855953
Status
Public on Mar 01, 2012
Title
Pediatric_GBM_30
Sample type
RNA
Source name
Primary brain tumor tissue
Organism
Homo sapiens
Characteristics
disease state: paediatric glioblastoma
age: 6
gender: M
h3.3_status: wt
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
biotin
Label protocol
Affymetrix protocol
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
Gene expression data from a primary pediatric glioblastoma
Data processing
Normalization according to MAS5.0 algorithm. Only probesets called present in at least one sample were included
Submission date
Jan 03, 2012
Last update date
Mar 01, 2012
Contact name
Marcel Kool
E-mail(s)
m.kool@dkfz.de
Phone
00496221424636
Organization name
German Cancer Research Center
Department
Pediatric Neuro Oncology
Street address
Im Neuenheimer Feld 580
City
Heidelberg
ZIP/Postal code
69120
Country
Germany
Platform ID
GPL570
Series (1)
GSE34824
Frequent driver mutations in histone H3.3 and chromatin remodeling genes in paediatric glioblastoma
Data table header descriptions
ID_REF
VALUE
MAS5.0 signal intensity
Data table
ID_REF
VALUE
1552829_at
53.9
1552867_at
46.8
1552972_at
1.6
1552976_at
29.7
1553269_at
31.6
1553275_s_at
41.1
1553538_s_at
12158.6
1553547_at
29.3
1553569_at
10742.2
1553570_x_at
10983.3
1553575_at
165.2
1553979_at
1165.2
1554007_at
61.2
1554043_a_at
91.1
1554103_at
13.9
1554108_at
17.3
1554220_a_at
12.7
1554224_at
9
1554225_a_at
11.6
1554266_at
30.8
Total number of rows:
40777
Table truncated, full table size
632 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM855953.CEL.gz
4.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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