NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM855957 Query DataSets for GSM855957
Status Public on Mar 01, 2012
Title Pediatric_GBM_4
Sample type RNA
 
Source name Primary brain tumor tissue
Organism Homo sapiens
Characteristics disease state: paediatric glioblastoma
age: 10
gender: M
h3.3_status: K27M
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description Gene expression data from a primary pediatric glioblastoma
Data processing Normalization according to MAS5.0 algorithm. Only probesets called present in at least one sample were included
 
Submission date Jan 03, 2012
Last update date Mar 01, 2012
Contact name Marcel Kool
E-mail(s) m.kool@dkfz.de
Phone 00496221424636
Organization name German Cancer Research Center
Department Pediatric Neuro Oncology
Street address Im Neuenheimer Feld 580
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL570
Series (2)
GSE34824 Frequent driver mutations in histone H3.3 and chromatin remodeling genes in paediatric glioblastoma
GSE49822 Gene expression data of pHGG tumor samples

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1552829_at 37.2
1552867_at 44.7
1552972_at 2.6
1552976_at 21.9
1553269_at 55.4
1553275_s_at 15.7
1553538_s_at 8204.6
1553547_at 9.9
1553569_at 8462.5
1553570_x_at 8540.7
1553575_at 181.4
1553979_at 1552.6
1554007_at 146.6
1554043_a_at 112.6
1554103_at 13.1
1554108_at 32.6
1554220_a_at 13.6
1554224_at 1.8
1554225_a_at 19.7
1554266_at 22.5

Total number of rows: 40777

Table truncated, full table size 630 Kbytes.




Supplementary file Size Download File type/resource
GSM855957.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap