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Sample GSM855962 Query DataSets for GSM855962
Status Public on Mar 01, 2012
Title Pediatric_GBM_45
Sample type RNA
 
Source name Primary brain tumor tissue
Organism Homo sapiens
Characteristics disease state: paediatric glioblastoma
age: 9
gender: M
h3.3_status: wt
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description Gene expression data from a primary pediatric glioblastoma
Data processing Normalization according to MAS5.0 algorithm. Only probesets called present in at least one sample were included
 
Submission date Jan 03, 2012
Last update date Mar 01, 2012
Contact name Marcel Kool
E-mail(s) m.kool@dkfz.de
Phone 00496221424636
Organization name German Cancer Research Center
Department Pediatric Neuro Oncology
Street address Im Neuenheimer Feld 580
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL570
Series (1)
GSE34824 Frequent driver mutations in histone H3.3 and chromatin remodeling genes in paediatric glioblastoma

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1552829_at 16.2
1552867_at 10.6
1552972_at 1.1
1552976_at 20.4
1553269_at 27.6
1553275_s_at 5.1
1553538_s_at 6392.9
1553547_at 11.4
1553569_at 6742
1553570_x_at 6867.8
1553575_at 90.6
1553979_at 1016
1554007_at 167
1554043_a_at 22.5
1554103_at 12
1554108_at 28.1
1554220_a_at 7.6
1554224_at 1.5
1554225_a_at 5.6
1554266_at 30.1

Total number of rows: 40777

Table truncated, full table size 627 Kbytes.




Supplementary file Size Download File type/resource
GSM855962.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table
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