NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM862626 Query DataSets for GSM862626
Status Public on Dec 31, 2014
Title c-Maf mutant #2
Sample type RNA
 
Source name mouse dorsal root ganglion, c-Maf mutant
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
genotype: c-Maf mutant
age: 15 days
tissue: dorsal root ganglion
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with the QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 4936640004_D
Replicate 2 of 6.
Data processing The data were normalized using quantile normalization with Illumina Genome Studio.
 
Submission date Jan 17, 2012
Last update date Dec 31, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL6885
Series (1)
GSE35148 Genome-wide analysis of P15 dorsal root ganglion gene expression of control and Isl1-Cre//c-Maf mutant mice

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 35.81262 0.01879699
ILMN_2707227 24.70526 0.04511278
ILMN_2896528 2811.774 0
ILMN_2721178 466.4553 0
ILMN_1227723 264.7634 0
ILMN_3033922 522.2635 0
ILMN_3092673 2944.174 0
ILMN_2730714 4697.291 0
ILMN_3162224 1217.63 0
ILMN_2816356 18.21149 0.08521304
ILMN_2808939 572.3156 0
ILMN_2634564 385.8111 0
ILMN_1216623 544.0637 0
ILMN_1215157 824.1088 0
ILMN_1228777 -5.447691 0.6629072
ILMN_2737647 -5.690339 0.6741855
ILMN_1216425 -6.041907 0.6804512
ILMN_2734484 702.614 0
ILMN_2652961 -1.572599 0.4749373
ILMN_2952292 141.7719 0

Total number of rows: 25697

Table truncated, full table size 735 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap