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Sample GSM862629 Query DataSets for GSM862629
Status Public on Dec 31, 2014
Title c-Maf mutant #5
Sample type RNA
 
Source name mouse dorsal root ganglion, c-Maf mutant
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
genotype: c-Maf mutant
age: 15 days
tissue: dorsal root ganglion
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with the QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 4936640006_C
Replicate 5 of 6.
Data processing The data were normalized using quantile normalization with Illumina Genome Studio.
 
Submission date Jan 17, 2012
Last update date Dec 31, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL6885
Series (1)
GSE35148 Genome-wide analysis of P15 dorsal root ganglion gene expression of control and Isl1-Cre//c-Maf mutant mice

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 22.3319 0.04761905
ILMN_2707227 22.89456 0.04511278
ILMN_2896528 3308.466 0
ILMN_2721178 563.2902 0
ILMN_1227723 247.4898 0
ILMN_3033922 566.4983 0
ILMN_3092673 2992.006 0
ILMN_2730714 4748.83 0
ILMN_3162224 1398.715 0
ILMN_2816356 12.16508 0.1303258
ILMN_2808939 434.113 0
ILMN_2634564 294.407 0
ILMN_1216623 470.9447 0
ILMN_1215157 721.8687 0
ILMN_1228777 6.860271 0.2205514
ILMN_2737647 1.460623 0.3721805
ILMN_1216425 -11.04599 0.8621554
ILMN_2734484 754.4675 0
ILMN_2652961 -3.309428 0.5601504
ILMN_2952292 127.8101 0

Total number of rows: 25697

Table truncated, full table size 736 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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