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Sample GSM874716 Query DataSets for GSM874716
Status Public on Feb 08, 2015
Title control (replicate 4)
Sample type RNA
 
Source name control
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
age: 15 days
tissue: dorsal skin
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 5511150079_b
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
 
Submission date Feb 13, 2012
Last update date Feb 08, 2015
Contact name Ozlem Akilli Ozturk
E-mail(s) akilli@mdc-berlin.de
Organization name Max Delbruck Center for Molecular Medicine
Department Cancer Research
Lab Walter Birchmeier
Street address Robert-Rosslestr. 10
City Berlin
ZIP/Postal code 13125
Country Germany
 
Platform ID GPL6885
Series (2)
GSE35779 Genome-wide analysis of dorsal skin gene expression of control, Krox20-cre:Shp2fl, Krox20-cre; Mek1fstop/+ and double mutant mice
GSE35780 The Functional Role of Gab1 and MAPK Signaling in Hair Cycle and Stem Cell Quisecence

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212607 87.8 0.0188
ILMN_1212612 99.5 0.00376
ILMN_1212619 1355.1 0
ILMN_1212628 62.3 0.59524
ILMN_1212632 78.6 0.06642
ILMN_1212636 1384.2 0
ILMN_1212637 502.9 0
ILMN_1212645 450.3 0
ILMN_1212648 171.5 0
ILMN_1212653 193.8 0
ILMN_1212672 80.4 0.04887
ILMN_1212682 79.5 0.05263
ILMN_1212683 59.7 0.74311
ILMN_1212685 70.2 0.21554
ILMN_1212692 1046.2 0
ILMN_1212693 247.9 0
ILMN_1212695 61.6 0.62531
ILMN_1212698 57.5 0.84211
ILMN_1212702 10898.5 0
ILMN_1212703 195.5 0

Total number of rows: 25697

Table truncated, full table size 603 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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