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Sample GSM874719 Query DataSets for GSM874719
Status Public on Feb 08, 2015
Title Shp2lof (replicate 3)
Sample type RNA
 
Source name Shp2lof
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
age: 15 days
tissue: dorsal skin
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 5511150079_c
Data processing The data were normalised using quantile normalisation with Illumina Genome Studio
 
Submission date Feb 13, 2012
Last update date Feb 08, 2015
Contact name Ozlem Akilli Ozturk
E-mail(s) akilli@mdc-berlin.de
Organization name Max Delbruck Center for Molecular Medicine
Department Cancer Research
Lab Walter Birchmeier
Street address Robert-Rosslestr. 10
City Berlin
ZIP/Postal code 13125
Country Germany
 
Platform ID GPL6885
Series (2)
GSE35779 Genome-wide analysis of dorsal skin gene expression of control, Krox20-cre:Shp2fl, Krox20-cre; Mek1fstop/+ and double mutant mice
GSE35780 The Functional Role of Gab1 and MAPK Signaling in Hair Cycle and Stem Cell Quisecence

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212607 91.8 0.03383
ILMN_1212612 93.4 0.02757
ILMN_1212619 1080.8 0
ILMN_1212628 65.3 0.70551
ILMN_1212632 84 0.1015
ILMN_1212636 1752.5 0
ILMN_1212637 532.7 0
ILMN_1212645 796.9 0
ILMN_1212648 230.7 0
ILMN_1212653 178.8 0
ILMN_1212672 163.4 0
ILMN_1212682 81.4 0.1416
ILMN_1212683 64.3 0.76316
ILMN_1212685 70.9 0.41103
ILMN_1212692 1325.1 0
ILMN_1212693 264.5 0
ILMN_1212695 75.5 0.24185
ILMN_1212698 68.5 0.52882
ILMN_1212702 13598.8 0
ILMN_1212703 167.4 0

Total number of rows: 25697

Table truncated, full table size 598 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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