|
| Status |
Public on Dec 31, 2012 |
| Title |
air-breathing E18.5 Mutant lung rep1 |
| Sample type |
RNA |
| |
|
| Source name |
lung tissue
|
| Organism |
Mus musculus |
| Characteristics |
strain: C57BL/6
age: embryonic 18.5 day
tissue: lung
treatment: air
genotype: snx5 null
|
| Growth protocol |
preparation of whole mouse lung tissue at E18.5
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
standard protocol as outlined in the Illumina Gene Expression System Manual
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
standard protocol for Illumina BeadScan 500 System
|
| Description |
Air MT
|
| Data processing |
The data were normalised using quantile normalization method with beadarray version 1.10 and lumi version 1.8.3 in R/Bioconductor package.
|
| |
|
| Submission date |
Apr 06, 2012 |
| Last update date |
Dec 31, 2012 |
| Contact name |
Hyobin Jeong |
| E-mail(s) |
h.jeong@imb-mainz.de
|
| Organization name |
IMB
|
| Street address |
Richard shirrmann Str 12.
|
| City |
Mainz |
| State/province |
Germany |
| ZIP/Postal code |
55112 |
| Country |
Germany |
| |
|
| Platform ID |
GPL6885 |
| Series (1) |
| GSE37080 |
Disruption of sorting nexin 5 causes respiratory failure associated with undifferentiated alveolar epithelial type I cells in mice |
|
