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Sample GSM91476 Query DataSets for GSM91476
Status Public on Jan 12, 2006
Title Uey-ate-rep2
Sample type RNA
 
Source name third instar antennal discs
Organism Drosophila melanogaster
Characteristics Third instar UAS-ey/dpp-GAL4 antennal discs
Extracted molecule total RNA
Extraction protocol Trizol total RNA
Label biotin
Label protocol cDNA synthesis was carried out as described in the Expression Analysis Technical Manual (Affymetrix, two-cycle protocol) using 100 ng of total RNA for each sample. The cRNA reactions were carried out using the BioArray High-Yield Transcript Labeling kit (Enzo).
 
Hybridization protocol Fifteen micrograms of labeled cRNA was fragmented and sequentially hybridized to the Affymetrix Drosophila Genome Array 2 following the manufacturer’s instructions.
Scan protocol Standard Affymetrix protocol.
Description Genome-Wide Identification of Direct Targets of the Drosophila Retinal Determination Protein Eyeless
Data processing dChip
 
Submission date Jan 10, 2006
Last update date Mar 12, 2007
Contact name rui chen
E-mail(s) ruichen@bcm.tmc.edu
Phone 7137985194
Organization name Baylor College of Medicine
Department HGSC, Department of Molecular and Human Gentics
Street address One Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL1322
Series (1)
GSE4008 Genome-Wide Identification of Direct Targets of the Drosophila Retinal Determination Protein Eyeless

Data table header descriptions
ID_REF
VALUE probe set value

Data table
ID_REF VALUE
AFFX-BioB-5_at 9.35096
AFFX-BioB-M_at 9.31872
AFFX-BioB-3_at 9.36764
AFFX-BioC-5_at 10.2019
AFFX-BioC-3_at 9.86592
AFFX-BioDn-5_at 10.9762
AFFX-BioDn-3_at 12.4627
AFFX-CreX-5_at 13.2688
AFFX-CreX-3_at 13.6505
AFFX-DapX-5_at 7.23701
AFFX-DapX-M_at 9.71323
AFFX-DapX-3_at 11.2114
AFFX-LysX-5_at 6.91296
AFFX-LysX-M_at 7.8677
AFFX-LysX-3_at 9.09003
AFFX-PheX-5_at 7.11977
AFFX-PheX-M_at 8.00843
AFFX-PheX-3_at 9.01141
AFFX-ThrX-5_at 7.09546
AFFX-ThrX-M_at 7.7479

Total number of rows: 18952

Table truncated, full table size 358 Kbytes.




Supplementary data files not provided

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