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Sample GSM916517 Query DataSets for GSM916517
Status Public on Sep 23, 2014
Title CCC
Sample type RNA
 
Source name 4T1 cells purified from systemic circulation
Organism Mus musculus
Characteristics Sex: female
age: 10-12 weeks old
strain: Balb/C
Extracted molecule total RNA
Extraction protocol RNA was extracted with RNeasy Plus Mini Kit (Qiagen) with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data was renered using Genome Studio, normalization: rank invariant, background substracted
 
Submission date Apr 17, 2012
Last update date Sep 23, 2014
Contact name Valerie LeBleu
E-mail(s) vlebleumdaprofessional@gmail.com
Organization name MDACC
Street address 1881 East Road
City Houston
State/province TX
ZIP/Postal code 77054
Country USA
 
Platform ID GPL6885
Series (1)
GSE37344 PGC-1α mediates mitochondrial biogenesis and oxidative phosphorylation in cancer cells to promote metastasis

Data table header descriptions
ID_REF
VALUE Rank invariant, background substracted
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 957.1822 0
ILMN_2721178 235.4505 0
ILMN_3033922 708.8198 0
ILMN_3092673 3234.046 0
ILMN_2816356 35.44009 0.03634085
ILMN_2808939 573.4801 0
ILMN_2634564 441.9595 0
ILMN_2737647 9.50967 0.4586466
ILMN_2734484 604.0877 0
ILMN_2952292 82.31709 0
ILMN_2699078 8.318761 0.4987469
ILMN_1213681 232.1686 0
ILMN_2735413 17.768 0.1716792
ILMN_2735415 24.09299 0.0952381
ILMN_2891688 429.8112 0
ILMN_2637698 1632.884 0
ILMN_2674228 379.4439 0
ILMN_2601546 31.08739 0.05137845
ILMN_1230831 3.407494 0.7518797
ILMN_2848071 29.20696 0.0689223

Total number of rows: 25697

Table truncated, full table size 726 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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