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Sample GSM926235 Query DataSets for GSM926235
Status Public on May 06, 2012
Title High_652
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3045346645567 12702.2 2907.04167184322 0 33
ILMN_2721178 10.3927637585896 2713.5 600.726370359251 0 45
ILMN_3033922 10.9015174827236 4251.8 1165.44310200885 0 45
ILMN_3092673 12.6847272099512 16618 3246.96345590769 0 40
ILMN_2816356 9.07273530776051 497.2 217.19042454031 0.01003 33
ILMN_2808939 10.7049053457329 3576.4 657.479558349915 0 48
ILMN_2634564 9.99391994864929 1815.5 545.912745027994 0 39
ILMN_2737647 9.02965728444192 455.2 196.57888123092 0.02882 34
ILMN_2734484 11.2031636825088 5519.9 1491.98339543542 0 55
ILMN_2952292 9.19248828084231 635.5 192.271372346483 0.00125 44
ILMN_2699078 9.02152016479852 447.9 144.306344628363 0.03509 44
ILMN_1213681 9.7806399420865 1425.6 433.529149019994 0 42
ILMN_2735413 8.91350655745484 372.7 145.543013916849 0.46241 41
ILMN_2735415 8.98504145222431 417.2 111.263712480754 0.12531 35
ILMN_2891688 10.836532108161 4036.6 956.231915367815 0 43
ILMN_2637698 11.2228497735685 5639.1 1381.20476591923 0 38
ILMN_2674228 9.7271434340961 1334 476.773230153498 0 31
ILMN_2601546 8.94071839520198 387.5 129.246538243777 0.3183 37
ILMN_1230831 9.02737930199556 453.3 156.509479904573 0.03258 37
ILMN_2848071 9.03972203415648 464.6 150.392664166175 0.02005 35

Total number of rows: 25697

Table truncated, full table size 1522 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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