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Sample GSM926238 Query DataSets for GSM926238
Status Public on May 06, 2012
Title High_665
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3511815125215 5248.7 1327.01590762809 0 42
ILMN_2721178 10.3980653404164 1286.3 324.532845795306 0 55
ILMN_3033922 10.9899859034372 1987.4 498.561359493493 0 55
ILMN_3092673 12.5669933269365 6135.2 1511.64548049832 0 39
ILMN_2816356 8.90841604774415 383.3 112.368427242709 0.52632 41
ILMN_2808939 10.7215099495389 1628.1 472.773567543703 0 38
ILMN_2634564 10.0484049942422 980.5 245.909111079683 0 32
ILMN_2737647 8.92573068233854 390.5 118.319026872266 0.43985 30
ILMN_2734484 11.2026154035224 2320.6 749.7 0 49
ILMN_2952292 9.15383027830406 480 155.852592509717 0.00251 53
ILMN_2699078 9.07179766102738 448.8 151.79104850748 0.03634 47
ILMN_1213681 9.80116985081843 817.7 242.099079923902 0 45
ILMN_2735413 8.79837561314907 338.5 98.988 0.91604 36
ILMN_2735415 8.86415345695326 365.5 86.8986760888795 0.72682 34
ILMN_2891688 10.7773329691207 1697.2 386.70601923425 0 38
ILMN_2637698 11.2473800104648 2399.1 592.956378560008 0 43
ILMN_2674228 9.87984263556908 864.6 376.7347867665 0 40
ILMN_2601546 8.8566810769568 362.4 89.3978816024183 0.75689 35
ILMN_1230831 9.06913606964216 447.8 109.21587796653 0.03759 30
ILMN_2848071 8.98390875931286 414.3 127.202977909324 0.20551 29

Total number of rows: 25697

Table truncated, full table size 1518 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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