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Sample GSM926243 Query DataSets for GSM926243
Status Public on May 06, 2012
Title High_711
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.2585097479316 6124.3 1360.345 0 49
ILMN_2721178 10.4938351441714 1593.2 477.153560187913 0 47
ILMN_3033922 10.9717084970958 2344.3 795.486805013131 0 38
ILMN_3092673 12.5134514949901 7288.2 1354.47137087463 0 39
ILMN_2816356 9.09307813225195 431 128.561928439177 0.01504 41
ILMN_2808939 10.8696073704637 2156.4 585.316782156466 0 34
ILMN_2634564 10.165865647877 1211.9 335.472036324937 0 21
ILMN_2737647 8.94497366977684 365.5 148.476 0.34586 36
ILMN_2734484 11.1119121117023 2587.4 726.319717892885 0 46
ILMN_2952292 9.19329457435528 482.3 160.781835177361 0.00251 43
ILMN_2699078 8.93367033797315 360.7 112.028952168625 0.401 44
ILMN_1213681 9.7931107794826 875.8 239.320276382926 0 43
ILMN_2735413 8.96778765422444 375.1 145.301946576775 0.25564 31
ILMN_2735415 8.94497366977684 365.5 132.957902454123 0.34586 33
ILMN_2891688 10.6875717771305 1863.5 377.746556603763 0 34
ILMN_2637698 11.1630376581773 2678.1 627.779245568058 0 46
ILMN_2674228 9.92593085934933 981.2 290.572207081132 0 58
ILMN_2601546 8.97522283383061 378.4 125.250163261371 0.2218 37
ILMN_1230831 8.92402913744765 356.5 109.120718472708 0.44737 32
ILMN_2848071 9.02595231659422 400.5 146.854848455882 0.06642 35

Total number of rows: 25697

Table truncated, full table size 1522 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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