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Sample GSM926248 Query DataSets for GSM926248
Status Public on May 06, 2012
Title High_727
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.343449567776 7781.4 2204.937 0 49
ILMN_2721178 10.4314681492659 1713.7 519.63863135837 0 50
ILMN_3033922 10.6957411711254 2153.3 601.908 0 36
ILMN_3092673 12.6280263497989 9548.7 2609.53921818451 0 43
ILMN_2816356 8.90005284979031 341.6 121.704304229555 0.55514 33
ILMN_2808939 10.8249841909457 2411.2 798.537426635721 0 42
ILMN_2634564 9.99013900292372 1164.3 321.845048240609 0 37
ILMN_2737647 8.97158399067795 373.6 142.484265264625 0.19925 38
ILMN_2734484 11.2575115077527 3414.3 963.15070180995 0 37
ILMN_2952292 9.14418192572937 462.9 157.499841631666 0.00125 34
ILMN_2699078 8.96949476603645 372.6 121.317663808697 0.20927 47
ILMN_1213681 9.62213866280391 800.6 241.010275299623 0 50
ILMN_2735413 8.86052648352729 325 137.106 0.73308 36
ILMN_2735415 8.93783097470907 357.8 96.2188864620663 0.36842 48
ILMN_2891688 10.6391824544748 2061 470.523826583734 0 23
ILMN_2637698 11.1670075163489 3180.5 693.112542039891 0 37
ILMN_2674228 9.77272324964728 937 317.53070028739 0 33
ILMN_2601546 8.91904430274978 350.1 126.786119114042 0.4599 48
ILMN_1230831 9.17651511345227 484 210.071703915592 0.00125 34
ILMN_2848071 9.01667731149144 394.1 138.572571780999 0.07644 34

Total number of rows: 25697

Table truncated, full table size 1523 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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