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Sample GSM926254 Query DataSets for GSM926254
Status Public on May 06, 2012
Title High_797
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.8532386524821 4449.6 1149.88997649775 0 50
ILMN_2721178 10.9940510604729 1226.4 311.613455001545 0 42
ILMN_3033922 11.3308725451702 1539.8 371.063313037007 0 58
ILMN_3092673 12.8625060471555 4471.2 931.119 0 49
ILMN_2816356 8.93369263515668 365.4 106.644958605646 0.49624 31
ILMN_2808939 10.8051975226482 1082.2 303.519009869234 0 42
ILMN_2634564 10.2730980362478 776.3 206.93904215493 0 32
ILMN_2737647 8.8666707228613 339.1 107.814637967207 0.76817 35
ILMN_2734484 11.1831069609809 1398.3 351.297425268105 0 40
ILMN_2952292 9.21123999917686 429.8 113.949513206507 0.02005 40
ILMN_2699078 9.17958928830861 424.3 127.657500758867 0.03383 28
ILMN_1213681 9.97837943889203 649.7 183.820367750693 0 51
ILMN_2735413 8.88689708467501 347.2 123.02410415443 0.69549 43
ILMN_2735415 8.88526507195722 346.6 115.390005199757 0.7005 37
ILMN_2891688 11.1622746464714 1380.7 276.785 0 25
ILMN_2637698 11.2334521742596 1439 361.301500531066 0 46
ILMN_2674228 9.95629591685139 642.5 189.259 0 49
ILMN_2601546 8.90588805938821 355 99.834 0.6203 36
ILMN_1230831 8.9871187535016 383.6 128.551822904228 0.27694 33
ILMN_2848071 8.89603390859738 350.9 148.121417850357 0.65163 26

Total number of rows: 25697

Table truncated, full table size 1526 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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