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Sample GSM926255 Query DataSets for GSM926255
Status Public on May 06, 2012
Title High_799
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.5069637781102 2909.8 598.948037946532 0 40
ILMN_2721178 10.8367355782784 927.7 222.532256933686 0 44
ILMN_3033922 11.2131135995206 1179.7 288.527850995359 0 50
ILMN_3092673 12.9545816086219 3910.6 769.583136877362 0 54
ILMN_2816356 8.84652388963331 283.1 90.537190071263 0.84586 34
ILMN_2808939 10.4951450259826 742.5 160.715888579817 0 42
ILMN_2634564 10.2481686030717 640.8 158.881723857718 0 31
ILMN_2737647 8.78426390897271 262.5 67.8606181522096 0.95113 34
ILMN_2734484 11.2152243706116 1181.4 294.471295714879 0 40
ILMN_2952292 9.06076320221809 339.3 81.2600739785536 0.11905 47
ILMN_2699078 8.95263690855974 315.3 85.3548595570281 0.39223 50
ILMN_1213681 9.97799837244152 545.6 152.473560350639 0 46
ILMN_2735413 8.86145004311184 287.7 97.1599658964535 0.78822 37
ILMN_2735415 8.8930065884343 297.7 76.8752697816404 0.67544 34
ILMN_2891688 10.9636044580656 1002.9 240.53298823862 0 31
ILMN_2637698 11.1196830554633 1110.9 266.451977286715 0 50
ILMN_2674228 9.95416659763126 538.5 210.238036527646 0 43
ILMN_2601546 8.94745618575745 313.7 94.9439605609541 0.41479 47
ILMN_1230831 9.01887249512089 331.4 109.614142372232 0.18922 43
ILMN_2848071 8.95546816097632 316.2 86.4360555555377 0.38095 37

Total number of rows: 25697

Table truncated, full table size 1531 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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