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Sample GSM926262 Query DataSets for GSM926262
Status Public on May 06, 2012
Title High_868
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.4240642868131 6648.8 1440.01943992156 0 38
ILMN_2721178 10.5256671865386 1602.2 435.382640859738 0 42
ILMN_3033922 10.9416503704366 2219.1 548.548347196489 0 47
ILMN_3092673 12.706372842138 8279.5 1771.65310887205 0 46
ILMN_2816356 8.94169923553424 382.2 107.683877493337 0.37093 32
ILMN_2808939 10.7651465531924 1941.4 491.920237436924 0 38
ILMN_2634564 10.0619884433606 1091.3 342.39311744689 0 35
ILMN_2737647 8.99857519869994 406 148.949476011163 0.15915 41
ILMN_2734484 11.2548065426722 2808.7 875.707040382227 0 47
ILMN_2952292 9.14974279342121 472.8 161.90299634349 0.00501 41
ILMN_2699078 8.93649197334725 380.1 88.704 0.39599 36
ILMN_1213681 9.76708306423919 844.2 277.921420009326 0 37
ILMN_2735413 8.98061220160085 398.2 118.096784630235 0.23935 35
ILMN_2735415 8.91543014665507 371 101.754109705702 0.50877 42
ILMN_2891688 10.6138664875275 1716.3 533.334 0 36
ILMN_2637698 11.1737829343512 2622.5 659.8524798203 0 45
ILMN_2674228 9.83639275634128 895.7 326.033103055503 0 42
ILMN_2601546 9.00092819587027 406.9 148.422 0.15038 36
ILMN_1230831 9.00224397986279 407.5 105.068050805181 0.14787 33
ILMN_2848071 8.97462471290404 395.9 118.79486674095 0.25188 44

Total number of rows: 25697

Table truncated, full table size 1516 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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