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Sample GSM926278 Query DataSets for GSM926278
Status Public on May 06, 2012
Title Low_687
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.274945250767 3293 865.97076357115 0 40
ILMN_2721178 10.5952054890412 1085.5 290.369466418217 0 52
ILMN_3033922 10.6961027687245 1164.5 294.897716640872 0 55
ILMN_3092673 12.6501684753318 4236.5 1170.792 0 49
ILMN_2816356 8.90554330083942 393 109.454472873428 0.61404 32
ILMN_2808939 10.6041756403038 1092 252.052454794632 0 32
ILMN_2634564 10.2563959774274 873.7 297.974171551831 0 47
ILMN_2737647 9.0283482040931 436.3 109.44554408015 0.18045 31
ILMN_2734484 11.0690430375388 1479.5 433.314104940054 0 65
ILMN_2952292 9.34657791022083 510 147.63701238172 0.00125 57
ILMN_2699078 8.98653607387646 423.9 136.43447127101 0.28321 39
ILMN_1213681 10.00964495458 756.4 181.137873455553 0 48
ILMN_2735413 8.88069853193165 382.4 103.060245550843 0.71805 37
ILMN_2735415 8.88042871787444 382.3 112.352609618113 0.7193 38
ILMN_2891688 10.6367647432977 1115.9 287.432277874285 0 39
ILMN_2637698 11.4663523039403 1929.3 452.028 0 36
ILMN_2674228 9.83399890397748 676.8 166.77219924196 0 40
ILMN_2601546 9.01557616940276 432.8 110.577589108282 0.21053 53
ILMN_1230831 8.93063530378034 403.1 123.916372219332 0.49248 26
ILMN_2848071 9.002883133128 429.1 115.383233964038 0.23308 30

Total number of rows: 25697

Table truncated, full table size 1526 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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