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Sample GSM926279 Query DataSets for GSM926279
Status Public on May 06, 2012
Title Low_688
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3355049738135 8493.2 1524.65400618632 0 45
ILMN_2721178 10.5510694019667 2125.5 486.116706172499 0 45
ILMN_3033922 10.9215286662769 2904.9 602.374207542122 0 38
ILMN_3092673 12.6995370423423 11022.9 1905.37812037532 0 45
ILMN_2816356 8.97043065201563 415.5 143.993207298122 0.23935 33
ILMN_2808939 10.7680433363388 2535.6 491.10624340055 0 43
ILMN_2634564 10.0441340832429 1348.3 359.104329998957 0 29
ILMN_2737647 8.88895762749008 379.9 101.956901012143 0.66165 31
ILMN_2734484 11.1188460699471 3399.4 1098.94840790639 0 40
ILMN_2952292 9.14905407962488 514.7 130.314733963585 0 42
ILMN_2699078 8.87773069252715 375.3 95.18321898318 0.70551 46
ILMN_1213681 9.83978428897355 1107.3 281.845188223961 0 45
ILMN_2735413 8.96209292023866 411.4 121.440054347814 0.28446 33
ILMN_2735415 8.9108661163854 388.9 94.5507870934981 0.54511 35
ILMN_2891688 10.7340213115308 2467.2 605.433566193682 0 34
ILMN_2637698 11.292402204552 3900.4 740.345193087657 0 37
ILMN_2674228 9.92943507249458 1206.2 444.112198580494 0 42
ILMN_2601546 9.0577290837719 460.1 178.395259488586 0.02506 37
ILMN_1230831 9.11027940670873 490.6 155.530293203607 0.00376 26
ILMN_2848071 9.01582134882076 437.6 141.769193240281 0.07644 38

Total number of rows: 25697

Table truncated, full table size 1514 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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