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Sample GSM926288 Query DataSets for GSM926288
Status Public on May 06, 2012
Title Low_736
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.4336872066669 7163.8 1146.45048754798 0 39
ILMN_2721178 10.5977336778395 1741 521.75814551955 0 44
ILMN_3033922 10.845944598943 2142.9 409.214023097938 0 47
ILMN_3092673 12.5310555440784 7677 1797.95294260028 0 45
ILMN_2816356 9.05118549250403 374.9 97.993945527262 0.06391 35
ILMN_2808939 10.723482555278 1940.4 579.202086888506 0 44
ILMN_2634564 10.1412474904752 1175.5 376.899126366724 0 26
ILMN_2737647 9.05034175912203 374.4 136.628071961804 0.06391 38
ILMN_2734484 11.1942652847288 2782.8 814.244513880198 0 56
ILMN_2952292 9.18150090950393 440.5 102.103621091517 0.01003 40
ILMN_2699078 8.92639072087132 313.8 77.0831891400453 0.45489 48
ILMN_1213681 9.71968922137446 790.7 194.043423985457 0 38
ILMN_2735413 8.88774221871996 299.1 81.6333265278342 0.62531 34
ILMN_2735415 8.98526610257068 341 101.015948834825 0.19424 31
ILMN_2891688 10.7577823404951 2003.9 425.493030553968 0 42
ILMN_2637698 11.3634252234654 3192.1 585.031866482502 0 32
ILMN_2674228 9.99043578199773 1022.1 322.1810211884 0 46
ILMN_2601546 9.03085464925129 364.5 119.154563697745 0.09148 50
ILMN_1230831 8.91840718238725 310.7 96.3166041292985 0.48747 39
ILMN_2848071 9.14896420743536 425.2 151.290820091637 0.01504 29

Total number of rows: 25697

Table truncated, full table size 1526 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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