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Sample GSM926289 Query DataSets for GSM926289
Status Public on May 06, 2012
Title Low_737
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3853762072699 5145.5 1399.43665451495 0 55
ILMN_2721178 10.617401772657 1450.9 326.933926012581 0 42
ILMN_3033922 10.7816797154084 1629.8 428.003189590919 0 28
ILMN_3092673 12.6976831123718 6360.9 1591.926 0 49
ILMN_2816356 9.03490320819737 426.9 124.129303937467 0.0802 34
ILMN_2808939 10.6192114459962 1452.7 413.144856785123 0 43
ILMN_2634564 10.1553910238626 1024.4 283.616619357893 0 24
ILMN_2737647 8.97416054577578 404.6 113.361329561716 0.2381 40
ILMN_2734484 11.2575115077527 2293.9 677.786386426432 0 57
ILMN_2952292 9.20872414342252 488.5 111.788303914139 0.00125 47
ILMN_2699078 8.81623181898869 344.3 75.7265722583559 0.89223 34
ILMN_1213681 9.72528872453555 742.7 176.771823467429 0 57
ILMN_2735413 8.75235090667686 321.1 85.0568727381862 0.97494 39
ILMN_2735415 8.98318492413824 407.9 136.588432617847 0.21053 37
ILMN_2891688 10.9694162476128 1863.3 347.653291611053 0 32
ILMN_2637698 11.3289388616837 2427.6 619.650213652832 0 45
ILMN_2674228 9.96042567808499 891.5 159.494256699105 0 45
ILMN_2601546 8.88784795525662 372.4 100.763931270073 0.63283 45
ILMN_1230831 9.02633218104588 423.5 119.489790990695 0.09774 31
ILMN_2848071 8.89703639149413 375.7 130.35070080364 0.6015 23

Total number of rows: 25697

Table truncated, full table size 1522 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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