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Sample GSM926290 Query DataSets for GSM926290
Status Public on May 06, 2012
Title Low_747
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3825527728471 3648.8 878.869426053723 0 53
ILMN_2721178 10.6106538248055 1044.6 240.3 0 36
ILMN_3033922 11.0335524445799 1390.1 362.670654495232 0 48
ILMN_3092673 12.6317973863777 4268.7 954.961850128056 0 50
ILMN_2816356 8.93422377335726 349.5 112.278636650077 0.46867 38
ILMN_2808939 10.7921836943179 1187.1 347.971383559051 0 41
ILMN_2634564 10.3199565499397 856.6 250.854810747173 0 43
ILMN_2737647 8.94431986044522 352.8 100.044 0.4198 36
ILMN_2734484 11.4727151949116 1877.2 513.975758183205 0 53
ILMN_2952292 9.27851357914637 430.9 104.000280288084 0.00251 47
ILMN_2699078 8.98585202113403 366 95.1437541933258 0.25689 42
ILMN_1213681 9.67152395093981 554.4 115.970253220384 0 47
ILMN_2735413 8.83095379946972 314.2 102.665570012541 0.85464 34
ILMN_2735415 9.05554443371516 384.2 139.013011462956 0.099 44
ILMN_2891688 10.9650366574114 1330.9 392.00323398666 0 34
ILMN_2637698 11.2405260299875 1599.5 355.80251596075 0 39
ILMN_2674228 9.83957484913526 618.5 184.946394733717 0 37
ILMN_2601546 9.11243732198454 396 130.864344869028 0.03759 38
ILMN_1230831 9.05651938767444 384.4 124.240424681341 0.099 37
ILMN_2848071 9.07161991014786 387.7 123.467618912815 0.0802 30

Total number of rows: 25697

Table truncated, full table size 1531 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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