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Sample GSM926293 Query DataSets for GSM926293
Status Public on May 06, 2012
Title Low_755
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3893794415538 6761.3 1511.21225724185 0 38
ILMN_2721178 10.7071620645696 1877.2 544.582560454336 0 39
ILMN_3033922 11.0537230948777 2446.9 736.22543843581 0 50
ILMN_3092673 12.9458344309948 9935.1 2850.25989757846 0 56
ILMN_2816356 9.12159165571068 412 184.152500976772 0.01128 39
ILMN_2808939 10.7079439678805 1878 615.917229344983 0 31
ILMN_2634564 10.1479094450886 1180.7 450.220614201527 0 43
ILMN_2737647 9.02407772381324 368.5 159.836375099662 0.11028 45
ILMN_2734484 11.141890478898 2652.8 791.626773300398 0 46
ILMN_2952292 9.17227957937625 436.8 151.863150652158 0.00251 46
ILMN_2699078 8.93961212146882 333.1 133.371 0.40226 49
ILMN_1213681 9.81353194074572 855.1 284.629092855948 0 45
ILMN_2735413 8.86052648352729 301.2 102.735758370686 0.78195 33
ILMN_2735415 8.78670572509897 274.4 83.2319178680871 0.93233 38
ILMN_2891688 10.8426688653283 2073.8 575.039415692524 0 39
ILMN_2637698 11.4709096157173 3346.3 1100.16117199936 0 47
ILMN_2674228 9.78844212552642 836.1 282.915641306733 0 41
ILMN_2601546 9.04735216392356 378.1 163.887110682933 0.07268 38
ILMN_1230831 9.07244243548817 389.5 142.580775141672 0.04511 40
ILMN_2848071 9.00229023107632 359.2 155.021915450687 0.17168 30

Total number of rows: 25697

Table truncated, full table size 1525 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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