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Sample GSM926295 Query DataSets for GSM926295
Status Public on May 06, 2012
Title Low_761
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3616144184179 10128 2137.06902579023 0 32
ILMN_2721178 10.4734562532027 2246.2 658.107928412962 0 40
ILMN_3033922 10.9288407399834 3324.2 790.746 0 36
ILMN_3092673 12.8202669011867 13729.3 2928.38562937483 0 41
ILMN_2816356 9.07483273888755 442.5 99.7576340888255 0.04637 31
ILMN_2808939 10.8104967989235 3012.2 895.398919476677 0 40
ILMN_2634564 10.1652774792691 1688.3 445.143517746805 0 32
ILMN_2737647 8.96901854721461 364.1 113.431241410821 0.23935 32
ILMN_2734484 11.0744992607628 3763.9 1018.67477533264 0 51
ILMN_2952292 9.15527346394005 500 162.19615346857 0.01504 50
ILMN_2699078 8.92272498972425 335.7 103.872211952957 0.45865 31
ILMN_1213681 9.79168341400871 1133.7 357.988804797022 0 40
ILMN_2735413 8.90063787527249 324.1 125.349196702651 0.56516 26
ILMN_2735415 9.01431884076687 397.8 130.207531368197 0.10276 41
ILMN_2891688 10.8832313444346 3212.1 831.463600956169 0 35
ILMN_2637698 11.4850070286754 5186.9 1186.24125817727 0 42
ILMN_2674228 9.94442296461316 1343.5 367.056 0 36
ILMN_2601546 8.99650725778222 383.8 95.776682569402 0.14787 31
ILMN_1230831 8.99832337779622 385.1 87.2524353299093 0.14787 31
ILMN_2848071 8.96776775761008 363.4 117.203185212689 0.24185 24

Total number of rows: 25697

Table truncated, full table size 1528 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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