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Sample GSM926297 Query DataSets for GSM926297
Status Public on May 06, 2012
Title Low_808
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.1841656125801 10244.2 1895.60801579256 0 33
ILMN_2721178 10.3905650218316 2430 513.029200711811 0 47
ILMN_3033922 10.9675567248106 3939.2 903.574 0 49
ILMN_3092673 12.6518037405491 14391.2 2742.22492114651 0 37
ILMN_2816356 9.04770880119233 477.5 134.762168637938 0.03008 31
ILMN_2808939 10.8369390483959 3568.2 872.912037795332 0 48
ILMN_2634564 10.0267553426959 1697.9 561.414650496405 0 37
ILMN_2737647 8.98842126318863 436.4 145.431293468772 0.15163 30
ILMN_2734484 11.0868480439171 4334.2 1472.64110616402 0 44
ILMN_2952292 9.1285361195351 545.4 171.206262335815 0.00125 47
ILMN_2699078 8.96855809922798 425 111.704279197352 0.20551 39
ILMN_1213681 9.81996750862315 1357.7 391.871507065773 0 50
ILMN_2735413 8.86737573585481 375.2 122.566843346804 0.73308 27
ILMN_2735415 8.94075277317203 410 128.479194051021 0.34336 34
ILMN_2891688 10.9859128257194 3997.7 1145.5546402132 0 34
ILMN_2637698 11.2410258231014 4968.9 1227.28378902029 0 42
ILMN_2674228 9.9735740512604 1597.3 526.365772796826 0 37
ILMN_2601546 8.9509033940858 415.2 107.827343656421 0.28947 40
ILMN_1230831 9.06170398314515 488.7 160.010467957568 0.0213 24
ILMN_2848071 9.0646505538294 490.8 181.008 0.0188 36

Total number of rows: 25697

Table truncated, full table size 1518 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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