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Sample GSM926298 Query DataSets for GSM926298
Status Public on May 06, 2012
Title Low_809
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3927417535389 6946.9 1525.0632066262 0 45
ILMN_2721178 10.5528044568503 1777.7 579.544200212546 0 48
ILMN_3033922 11.0106113267722 2526.1 785.872305082066 0 55
ILMN_3092673 12.686361382357 8434.6 2033.72648137551 0 38
ILMN_2816356 9.03245061030721 428.1 115.6091952528 0.07519 27
ILMN_2808939 10.5999481259073 1842 533.980076246296 0 33
ILMN_2634564 10.0910380372244 1211.4 345.701642884439 0 37
ILMN_2737647 8.94874259481126 393.1 116.990622854996 0.30952 44
ILMN_2734484 11.1376360833716 2751.8 734.157050097593 0 38
ILMN_2952292 9.11835629784096 469.2 138.045805658846 0.00752 35
ILMN_2699078 8.95807766058333 396.9 121.915694018449 0.27318 42
ILMN_1213681 10.0341331355462 1147.1 309.235023165229 0 42
ILMN_2735413 8.79359593520681 333.4 141.328265198438 0.92231 29
ILMN_2735415 8.93707418223367 388.5 125.283116340551 0.36216 40
ILMN_2891688 10.6348658878114 1890.1 692.64888884629 0 45
ILMN_2637698 11.4103887928265 3364.4 910.527800234567 0 46
ILMN_2674228 10.1575262155844 1291.3 475.981257441929 0 39
ILMN_2601546 8.93641112060637 388.2 139.307271719749 0.36967 34
ILMN_1230831 9.14318157236867 483 173.456056313984 0.00501 37
ILMN_2848071 9.04093173764374 431.9 97.0343413436707 0.06642 26

Total number of rows: 25697

Table truncated, full table size 1518 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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